Analysis of Ligand-Protein Contacts in PDB entry:
3KMV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 3KMV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
158 6GLYCEROL
lig 2
FMT
A
159 3FORMIC ACID
lig 3
FMT
A
160 3FORMIC ACID
lig 4
FMT
A
161 3FORMIC ACID
lig 5
FMT
A
162 3FORMIC ACID
lig 6
CA
A
163 1CALCIUM ION
lig 7
FMT
B
158 3FORMIC ACID
lig 8
FMT
B
159 3FORMIC ACID
lig 9
FMT
B
160 3FORMIC ACID
lig 10
FMT
B
161 3FORMIC ACID
lig 11
CA
B
162 1CALCIUM ION
lig 12
GOL
C
158 6GLYCEROL
lig 13
FMT
C
159 3FORMIC ACID
lig 14
FMT
C
160 3FORMIC ACID
lig 15
FMT
C
161 3FORMIC ACID
lig 16
FMT
C
162 3FORMIC ACID
lig 17
CA
C
163 1CALCIUM ION
lig 18
GOL
D
158 6GLYCEROL
lig 19
CA
D
159 1CALCIUM ION
lig 20
GOL
E
158 6GLYCEROL
lig 21
FMT
E
159 3FORMIC ACID
lig 22
FMT
E
160 3FORMIC ACID
lig 23
CA
E
161 1CALCIUM ION
lig 24
GOL
F
158 6GLYCEROL
lig 25
FMT
F
159 3FORMIC ACID
lig 26
CA
F
160 1CALCIUM ION
lig 27
ACT
G
158 4ACETATE ION
lig 28
FMT
G
159 3FORMIC ACID
lig 29
FMT
G
160 3FORMIC ACID
lig 30
FMT
G
161 3FORMIC ACID
lig 31
CA
G
162 1CALCIUM ION
lig 32
GOL
H
158 6GLYCEROL
lig 33
FMT
H
159 3FORMIC ACID
lig 34
CA
H
160 1CALCIUM ION