Analysis of Ligand-Protein Contacts in PDB entry:
3L88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 3L88. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
B
1 1SODIUM ION
lig 2
NA
B
3 1SODIUM ION
lig 3
GOL
C
2 6GLYCEROL
lig 4
GOL
E
5 6GLYCEROL
lig 5
GOL
E
6 6GLYCEROL
lig 6
GOL
F
3 6GLYCEROL
lig 7
NA
F
2 1SODIUM ION
lig 8
NA
F
7 1SODIUM ION
lig 9
NA
H
6 1SODIUM ION
lig 10
NA
I
11 1SODIUM ION
lig 11
NA
J
8 1SODIUM ION
lig 12
NA
J
9 1SODIUM ION
lig 13
CL
J
1 1CHLORIDE ION
lig 14
CL
J
2 1CHLORIDE ION
lig 15
NA
K
4 1SODIUM ION
lig 16
NA
K
5 1SODIUM ION
lig 17
NA
L
10 1SODIUM ION