Analysis of Ligand-Protein Contacts in PDB entry:
3LNJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 3LNJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DSG
B
2 8D-ASPARAGINE
lig 2
DTR
B
3 14D-TRYPTOPHAN
lig 3
DTY
B
4 12D-TYROSINE
lig 4
DAL
B
5 5D-ALANINE
lig 5
DSG
B
6 8D-ASPARAGINE
lig 6
DLE
B
7 8D-LEUCINE
lig 7
DGL
B
8 9D-GLUTAMIC ACID
lig 8
DLY
B
9 9D-LYSINE
lig 9
DLE
B
10 8D-LEUCINE
lig 10
DLE
B
11 8D-LEUCINE
lig 11
DAR
B
12 12D-ARGININE
lig 12
DSG
D
2 8D-ASPARAGINE
lig 13
DTR
D
3 14D-TRYPTOPHAN
lig 14
DTY
D
4 12D-TYROSINE
lig 15
DAL
D
5 5D-ALANINE
lig 16
DSG
D
6 8D-ASPARAGINE
lig 17
DLE
D
7 8D-LEUCINE
lig 18
DGL
D
8 9D-GLUTAMIC ACID
lig 19
DLY
D
9 9D-LYSINE
lig 20
DLE
D
10 8D-LEUCINE
lig 21
DLE
D
11 8D-LEUCINE
lig 22
DAR
D
12 12D-ARGININE
lig 23
DTR
F
3 14D-TRYPTOPHAN
lig 24
DTY
F
4 12D-TYROSINE
lig 25
DSG
F
6 8D-ASPARAGINE
lig 26
DLE
F
7 8D-LEUCINE
lig 27
DGL
F
8 9D-GLUTAMIC ACID
lig 28
DLY
F
9 9D-LYSINE
lig 29
DLE
F
10 8D-LEUCINE
lig 30
DLE
F
11 8D-LEUCINE
lig 31
DAR
F
12 12D-ARGININE
lig 32
SO4
A
201 5SULFATE ION
lig 33
CL
C
201 1CHLORIDE ION
lig 34
GOL
E
201 6GLYCEROL