Analysis of Ligand-Protein Contacts in PDB entry:
3LPP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 3LPP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
2001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
4001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
TRS
A
6001 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 18
PEG
A
7001 7DI(HYDROXYETHYL)ETHER
lig 19
CL
A
8001 1CHLORIDE ION
lig 20
NAG
B
2001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
B
3003 11BETA-D-MANNOPYRANOSE
lig 22
KTL
B
5001 26 HYDROXYETHYL}-2,3,4,5-TETRAHYDROXYPENTYL
lig 23
PEG
B
7001 7DI(HYDROXYETHYL)ETHER
lig 24
NAG
C
2001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
C
3001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
C
4001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
TRS
C
6001 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 28
PEG
C
7001 7DI(HYDROXYETHYL)ETHER
lig 29
KTL
D
5001 26 HYDROXYETHYL}-2,3,4,5-TETRAHYDROXYPENTYL
lig 30
PEG
D
7001 7DI(HYDROXYETHYL)ETHER