Analysis of Ligand-Protein Contacts in PDB entry:
3M8R


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 3M8R. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DOC
B
112 182',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE
lig 2
HXZ
A
113 314'-ETHYLTHYMIDINE 5'-(TETRAHYDROGEN TRIPHO
lig 3
MG
A
1 1MAGNESIUM ION
lig 4
MG
A
2 1MAGNESIUM ION
lig 5
15P
A
833 13POLYETHYLENE GLYCOL (N=34)
lig 6
GOL
A
834 6GLYCEROL
lig 7
GOL
A
5 6GLYCEROL
lig 8
15P
A
6 7POLYETHYLENE GLYCOL (N=34)
lig 9
ACT
A
7 4ACETATE ION
lig 10
GOL
B
4 6GLYCEROL
lig 11
GOL
C
3 6GLYCEROL