Analysis of Ligand-Protein Contacts in PDB entry:
3M8Z


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 18 ligands in PDB entry 3M8Z. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
85 11PHOSPHOTHREONINE
lig 2
TPO
B
85 11PHOSPHOTHREONINE
lig 3
TPO
C
85 11PHOSPHOTHREONINE
lig 4
MN
A
395 1MANGANESE (II) ION
lig 5
MN
A
396 1MANGANESE (II) ION
lig 6
MN
A
397 1MANGANESE (II) ION
lig 7
TRS
A
398 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 8
ACT
A
399 4ACETATE ION
lig 9
GOL
A
400 6GLYCEROL
lig 10
HSX
A
401 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 11
MN
B
395 1MANGANESE (II) ION
lig 12
MN
B
396 1MANGANESE (II) ION
lig 13
MN
B
397 1MANGANESE (II) ION
lig 14
TRS
B
398 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 15
GOL
B
399 6GLYCEROL
lig 16
MN
C
395 1MANGANESE (II) ION
lig 17
MN
C
396 1MANGANESE (II) ION
lig 18
MN
C
397 1MANGANESE (II) ION