Analysis of Ligand-Protein Contacts in PDB entry:
3MFD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3MFD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CIT
A
1 13CITRIC ACID
lig 2
EDO
A
359 41,2-ETHANEDIOL
lig 3
EDO
A
360 41,2-ETHANEDIOL
lig 4
EDO
A
361 41,2-ETHANEDIOL
lig 5
CIT
A
362 13CITRIC ACID
lig 6
EDO
A
363 41,2-ETHANEDIOL
lig 7
CIT
A
364 13CITRIC ACID
lig 8
CIT
B
1 13CITRIC ACID
lig 9
EDO
B
359 41,2-ETHANEDIOL
lig 10
EDO
B
360 41,2-ETHANEDIOL
lig 11
EDO
B
361 41,2-ETHANEDIOL
lig 12
EDO
B
362 41,2-ETHANEDIOL