Analysis of Ligand-Protein Contacts in PDB entry:
3MK2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 15 ligands in PDB entry 3MK2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
92 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
PHE
A
912 12PHENYLALANINE
lig 7
ZN
A
901 1ZINC ION
lig 8
ZN
A
902 1ZINC ION
lig 9
MG
A
903 1MAGNESIUM ION
lig 10
CA
A
904 1CALCIUM ION
lig 11
ACT
A
933 4ACETATE ION
lig 12
ACT
A
934 4ACETATE ION
lig 13
ACT
A
935 4ACETATE ION
lig 14
GOL
A
936 6GLYCEROL
lig 15
GOL
A
937 6GLYCEROL