Analysis of Ligand-Protein Contacts in PDB entry:
3MMD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 3MMD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
XYP
B
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
B
2 9BETA-D-XYLOPYRANOSE
lig 3
XYP
C
1 10BETA-D-XYLOPYRANOSE
lig 4
XYP
C
2 9BETA-D-XYLOPYRANOSE
lig 5
XYP
C
3 9BETA-D-XYLOPYRANOSE
lig 6
ZN
A
401 1ZINC ION
lig 7
NA
A
410 1SODIUM ION
lig 8
NA
A
411 1SODIUM ION
lig 9
NA
A
412 1SODIUM ION
lig 10
CL
A
420 1CHLORIDE ION
lig 11
CL
A
421 1CHLORIDE ION