Analysis of Ligand-Protein Contacts in PDB entry:
3N8V


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 3N8V. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NDG
C
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NDG
E
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 7
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NDG
F
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 12
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NDG
H
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 16
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 17
BMA
H
4 11BETA-D-MANNOPYRANOSE
lig 18
HEM
A
801 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
BOG
A
751 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 20
BOG
A
755 12OCTYL BETA-D-GLUCOPYRANOSIDE
lig 21
GOL
B
851 6GLYCEROL
lig 22
HEM
B
1801 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
BOG
B
1750 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 24
BOG
B
1751 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 25
BOG
B
1752 20OCTYL BETA-D-GLUCOPYRANOSIDE