Analysis of Ligand-Protein Contacts in PDB entry:
3NDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 3NDT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ARF
A
1 3FORMAMIDE
lig 2
ARF
B
1 3FORMAMIDE
lig 3
ROC
A
101 49 (QUINOLIN-2-YLCARBONYLAMINO)BUTANEDIAMIDE
lig 4
CL
A
102 1CHLORIDE ION
lig 5
DMS
A
103 4DIMETHYL SULFOXIDE
lig 6
DMS
A
104 4DIMETHYL SULFOXIDE
lig 7
NA
B
101 1SODIUM ION
lig 8
CL
B
102 1CHLORIDE ION
lig 9
CL
B
103 1CHLORIDE ION
lig 10
CL
B
104 1CHLORIDE ION
lig 11
CL
B
105 1CHLORIDE ION
lig 12
CL
B
106 1CHLORIDE ION
lig 13
NA
C
100 1SODIUM ION
lig 14
CL
C
101 1CHLORIDE ION
lig 15
DMS
C
102 4DIMETHYL SULFOXIDE
lig 16
DMS
C
103 4DIMETHYL SULFOXIDE
lig 17
ROC
D
100 49 (QUINOLIN-2-YLCARBONYLAMINO)BUTANEDIAMIDE