Analysis of Ligand-Protein Contacts in PDB entry:
3NDX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 3NDX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RIT
A
100 50RITONAVIR
lig 2
DMS
A
991 4DIMETHYL SULFOXIDE
lig 3
GOL
A
1041 6GLYCEROL
lig 4
CL
A
308 1CHLORIDE ION
lig 5
SO4
B
100 5SULFATE ION
lig 6
GOL
B
101 6GLYCEROL
lig 7
DMS
B
992 4DIMETHYL SULFOXIDE
lig 8
DMS
B
993 4DIMETHYL SULFOXIDE
lig 9
DMS
B
994 4DIMETHYL SULFOXIDE
lig 10
SO4
B
1040 5SULFATE ION