Analysis of Ligand-Protein Contacts in PDB entry:
3NED


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 5 ligands in PDB entry 3NED. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NRQ
A
67 23 YL}ACETIC ACID
lig 2
NA
A
232 1SODIUM ION
lig 3
ACT
A
233 4ACETATE ION
lig 4
NA
A
234 1SODIUM ION
lig 5
NA
A
235 1SODIUM ION