Analysis of Ligand-Protein Contacts in PDB entry:
3NOD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3NOD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SO4
A
907 5SULFATE ION
lig 2
HEM
A
901 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
H4B
A
902 175,6,7,8-TETRAHYDROBIOPTERIN
lig 4
SCI
A
906 12L-THIOCITRULLINE
lig 5
HEM
B
901 43PROTOPORPHYRIN IX CONTAINING FE
lig 6
H4B
B
902 175,6,7,8-TETRAHYDROBIOPTERIN
lig 7
SCI
B
906 12L-THIOCITRULLINE