Analysis of Ligand-Protein Contacts in PDB entry:
3OB8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 3OB8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
A
2001 12BETA-D-GALACTOPYRANOSE
lig 2
MG
A
3001 1MAGNESIUM ION
lig 3
NA
A
3002 1SODIUM ION
lig 4
NA
A
3003 1SODIUM ION
lig 5
NA
A
3004 1SODIUM ION
lig 6
MN
A
3005 1MANGANESE (II) ION
lig 7
NA
A
3006 1SODIUM ION
lig 8
GAL
B
2001 12BETA-D-GALACTOPYRANOSE
lig 9
MG
B
3001 1MAGNESIUM ION
lig 10
NA
B
3002 1SODIUM ION
lig 11
NA
B
3003 1SODIUM ION
lig 12
NA
B
3004 1SODIUM ION
lig 13
MN
B
3005 1MANGANESE (II) ION
lig 14
NA
B
3006 1SODIUM ION
lig 15
GAL
D
2001 12BETA-D-GALACTOPYRANOSE
lig 16
MG
D
3001 1MAGNESIUM ION
lig 17
NA
D
3002 1SODIUM ION
lig 18
NA
D
3003 1SODIUM ION
lig 19
NA
D
3004 1SODIUM ION
lig 20
MN
D
3005 1MANGANESE (II) ION
lig 21
NA
D
3006 1SODIUM ION
lig 22
GAL
C
2001 12BETA-D-GALACTOPYRANOSE
lig 23
MG
C
3001 1MAGNESIUM ION
lig 24
NA
C
3002 1SODIUM ION
lig 25
NA
C
3003 1SODIUM ION
lig 26
NA
C
3004 1SODIUM ION
lig 27
MN
C
3005 1MANGANESE (II) ION
lig 28
NA
C
3006 1SODIUM ION