Analysis of Ligand-Protein Contacts in PDB entry:
3OD2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3OD2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NI
A
134 1NICKEL (II) ION
lig 2
NI
A
135 1NICKEL (II) ION
lig 3
NI
A
136 1NICKEL (II) ION
lig 4
NI
A
137 1NICKEL (II) ION
lig 5
NI
A
138 1NICKEL (II) ION
lig 6
NI
A
139 1NICKEL (II) ION
lig 7
3CM
B
134 32 GLUCOPYRANOSIDE
lig 8
NI
B
135 1NICKEL (II) ION
lig 9
NI
B
136 1NICKEL (II) ION
lig 10
NI
B
137 1NICKEL (II) ION
lig 11
NI
B
138 1NICKEL (II) ION
lig 12
NI
B
139 1NICKEL (II) ION