Analysis of Ligand-Protein Contacts in PDB entry:
3OGR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 3OGR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 14
GLC
C
7 11ALPHA-D-GLUCOPYRANOSE
lig 15
MAN
C
8 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
C
9 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
C
10 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
GAL
A
1024 12BETA-D-GALACTOPYRANOSE
lig 21
NAG
A
1042 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
A
1043 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE