Analysis of Ligand-Protein Contacts in PDB entry:
3OK4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 3OK4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
A6C
A
1 18 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 2
A6C
A
2 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 3
A6G
A
3 24 ANHYDRO-2-DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 4
A6U
A
4 21 1(2H)-YL)-6-O-PHOSPHONO-D-ALTRITOL
lig 5
A6A
A
5 23 PHOSPHONO-D-ALTRITOL
lig 6
A6A
A
6 23 PHOSPHONO-D-ALTRITOL
lig 7
A6U
A
7 21 1(2H)-YL)-6-O-PHOSPHONO-D-ALTRITOL
lig 8
A6G
A
8 24 ANHYDRO-2-DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 9
A6C
A
9 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 10
A6C
A
10 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 11
PO4
A
11 4PHOSPHATE ION
lig 12
A6C
C
1 18 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 13
A6C
C
2 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 14
A6G
C
3 24 ANHYDRO-2-DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 15
A6U
C
4 21 1(2H)-YL)-6-O-PHOSPHONO-D-ALTRITOL
lig 16
A6A
C
5 23 PHOSPHONO-D-ALTRITOL
lig 17
A6A
C
6 23 PHOSPHONO-D-ALTRITOL
lig 18
A6U
C
7 21 1(2H)-YL)-6-O-PHOSPHONO-D-ALTRITOL
lig 19
A6G
C
8 24 ANHYDRO-2-DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 20
A6C
C
9 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 21
A6C
C
10 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 22
PO4
C
11 4PHOSPHATE ION
lig 23
A6C
E
1 18 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 24
A6C
E
2 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 25
A6G
E
3 24 ANHYDRO-2-DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 26
A6U
E
4 21 1(2H)-YL)-6-O-PHOSPHONO-D-ALTRITOL
lig 27
A6A
E
5 23 PHOSPHONO-D-ALTRITOL
lig 28
A6A
E
6 23 PHOSPHONO-D-ALTRITOL
lig 29
A6U
E
7 21 1(2H)-YL)-6-O-PHOSPHONO-D-ALTRITOL
lig 30
A6G
E
8 24 ANHYDRO-2-DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 31
A6C
E
9 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 32
A6C
E
10 21 DEOXY-6-O-PHOSPHONO-D-ALTRITOL
lig 33
PO4
E
11 4PHOSPHATE ION