Analysis of Ligand-Protein Contacts in PDB entry:
3P4A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 59 ligands in PDB entry 3P4A. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CFZ
A
101 172'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 2
GF2
A
102 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 3
AF2
A
103 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 4
AF2
A
104 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 5
UFT
A
105 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 6
UFT
A
106 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 7
CFZ
A
107 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 8
GF2
A
108 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 9
CFZ
B
209 172'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 10
GF2
B
210 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 11
AF2
B
211 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 12
AF2
B
212 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 13
UFT
B
213 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 14
UFT
B
214 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 15
CFZ
B
215 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 16
GF2
B
216 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 17
CFZ
C
301 172'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 18
GF2
C
302 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 19
AF2
C
303 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 20
AF2
C
304 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 21
UFT
C
305 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 22
UFT
C
306 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 23
CFZ
C
307 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 24
GF2
C
308 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 25
CFZ
D
409 172'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 26
GF2
D
410 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 27
AF2
D
411 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 28
AF2
D
412 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 29
UFT
D
413 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 30
UFT
D
414 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 31
CFZ
D
415 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 32
GF2
D
416 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 33
CFZ
E
501 172'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 34
GF2
E
502 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 35
AF2
E
503 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 36
AF2
E
504 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 37
UFT
E
505 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 38
UFT
E
506 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 39
CFZ
E
507 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 40
GF2
E
508 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 41
CFZ
F
609 172'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 42
GF2
F
610 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 43
AF2
F
611 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 44
AF2
F
612 222'-DEOXY-2'-FLUOROADENOSINE 5'-(DIHYDROGEN
lig 45
UFT
F
613 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 46
UFT
F
614 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 47
CFZ
F
615 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 48
GF2
F
616 232'-DEOXY-2'-FLUOROGUANOSINE 5'-(DIHYDROGEN
lig 49
SR
A
705 1STRONTIUM ION
lig 50
SR
B
704 1STRONTIUM ION
lig 51
MG
B
711 1MAGNESIUM ION
lig 52
SR
C
701 1STRONTIUM ION
lig 53
SR
C
707 1STRONTIUM ION
lig 54
SR
D
702 1STRONTIUM ION
lig 55
SR
D
708 1STRONTIUM ION
lig 56
SR
E
703 1STRONTIUM ION
lig 57
SR
E
709 1STRONTIUM ION
lig 58
MG
E
712 1MAGNESIUM ION
lig 59
SR
F
706 1STRONTIUM ION