Analysis of Ligand-Protein Contacts in PDB entry:
3P9Y


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 17 ligands in PDB entry 3P9Y. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
N7P
E
3 101-ACETYL-L-PROLINE
lig 2
SEP
E
5 10PHOSPHOSERINE
lig 3
SET
E
9 7AMINOSERINE
lig 4
N7P
F
3 101-ACETYL-L-PROLINE
lig 5
SEP
F
5 10PHOSPHOSERINE
lig 6
SET
F
9 7AMINOSERINE
lig 7
N7P
G
3 101-ACETYL-L-PROLINE
lig 8
SEP
G
5 10PHOSPHOSERINE
lig 9
SET
G
9 7AMINOSERINE
lig 10
N7P
H
3 101-ACETYL-L-PROLINE
lig 11
SEP
H
5 10PHOSPHOSERINE
lig 12
SET
H
9 7AMINOSERINE
lig 13
IMD
A
196 5IMIDAZOLE
lig 14
IMD
A
197 5IMIDAZOLE
lig 15
PG4
A
198 11TETRAETHYLENE GLYCOL
lig 16
IMD
B
196 5IMIDAZOLE
lig 17
IMD
C
196 5IMIDAZOLE