Analysis of Ligand-Protein Contacts in PDB entry:
3PD6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 3PD6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
LLP
B
279 24 YL]METHYLIDENEAMINO]HEXANOIC ACID
lig 2
LLP
D
279 24 YL]METHYLIDENEAMINO]HEXANOIC ACID
lig 3
PMP
A
1 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 4
GOL
A
431 6GLYCEROL
lig 5
GOL
A
432 6GLYCEROL
lig 6
GOL
A
433 6GLYCEROL
lig 7
KYN
B
1 15(2S)-2-AMINO-4-(2-AMINOPHENYL)-4-OXOBUTANO
lig 8
GOL
B
431 6GLYCEROL
lig 9
GOL
B
432 6GLYCEROL
lig 10
GOL
B
433 6GLYCEROL
lig 11
PMP
C
1 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 12
GOL
C
431 6GLYCEROL
lig 13
GOL
C
432 6GLYCEROL
lig 14
GOL
C
433 6GLYCEROL
lig 15
GOL
C
434 6GLYCEROL
lig 16
GOL
C
435 6GLYCEROL
lig 17
GOL
C
436 6GLYCEROL
lig 18
GOL
D
1 6GLYCEROL