Analysis of Ligand-Protein Contacts in PDB entry:
3PD8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 3PD8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ZN
A
260 1ZINC ION
lig 2
HA7
A
261 13 C]PYRIDINE-7-CARBOXYLIC ACID
lig 3
GOL
A
262 6GLYCEROL
lig 4
ACY
A
263 4ACETIC ACID
lig 5
ZN
B
260 1ZINC ION
lig 6
ZN
B
261 1ZINC ION
lig 7
HA7
B
262 13 C]PYRIDINE-7-CARBOXYLIC ACID
lig 8
ZN
C
260 1ZINC ION
lig 9
ZN
C
261 1ZINC ION
lig 10
HA7
C
262 13 C]PYRIDINE-7-CARBOXYLIC ACID
lig 11
CAC
C
263 5CACODYLATE ION