Analysis of Ligand-Protein Contacts in PDB entry:
3PD9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3PD9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HA5
A
260 13 C]PYRIDINE-5-CARBOXYLIC ACID
lig 2
SO4
A
261 5SULFATE ION
lig 3
SO4
A
262 5SULFATE ION
lig 4
SO4
A
263 5SULFATE ION
lig 5
GOL
A
264 6GLYCEROL
lig 6
GOL
A
265 6GLYCEROL
lig 7
CL
A
266 1CHLORIDE ION
lig 8
CL
A
267 1CHLORIDE ION
lig 9
CL
A
268 1CHLORIDE ION
lig 10
HA5
B
260 13 C]PYRIDINE-5-CARBOXYLIC ACID
lig 11
SO4
B
261 5SULFATE ION
lig 12
GOL
B
262 6GLYCEROL
lig 13
GOL
B
263 6GLYCEROL
lig 14
GOL
B
264 6GLYCEROL
lig 15
CL
B
265 1CHLORIDE ION