Analysis of Ligand-Protein Contacts in PDB entry:
3PDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 3PDI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
A
501 8IRON/SULFUR CLUSTER
lig 2
CZL
A
502 17L-CLUSTER (FE8S9)
lig 3
SF4
C
501 8IRON/SULFUR CLUSTER
lig 4
CZL
C
502 17L-CLUSTER (FE8S9)
lig 5
SF4
E
501 8IRON/SULFUR CLUSTER
lig 6
CZL
E
502 17L-CLUSTER (FE8S9)
lig 7
SF4
G
501 8IRON/SULFUR CLUSTER
lig 8
CZL
G
502 17L-CLUSTER (FE8S9)