Analysis of Ligand-Protein Contacts in PDB entry:
3PDQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3PDQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NI
A
501 1NICKEL (II) ION
lig 2
ZN
A
502 1ZINC ION
lig 3
KC6
A
503 21 CARBOXYLIC ACID
lig 4
CL
A
504 1CHLORIDE ION
lig 5
CL
A
505 1CHLORIDE ION
lig 6
CL
A
506 1CHLORIDE ION
lig 7
NA
A
507 1SODIUM ION
lig 8
CL
A
360 1CHLORIDE ION
lig 9
NI
B
501 1NICKEL (II) ION
lig 10
ZN
B
502 1ZINC ION
lig 11
KC6
B
503 21 CARBOXYLIC ACID
lig 12
CL
B
504 1CHLORIDE ION
lig 13
NA
B
506 1SODIUM ION