Analysis of Ligand-Protein Contacts in PDB entry:
3PFQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 9 ligands in PDB entry 3PFQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
500 11PHOSPHOTHREONINE
lig 2
TPO
A
641 11PHOSPHOTHREONINE
lig 3
SEP
A
660 10PHOSPHOSERINE
lig 4
CA
A
674 1CALCIUM ION
lig 5
CA
A
675 1CALCIUM ION
lig 6
CA
A
676 1CALCIUM ION
lig 7
ZN
A
750 1ZINC ION
lig 8
ZN
A
751 1ZINC ION
lig 9
ANP
A
800 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE