Analysis of Ligand-Protein Contacts in PDB entry:
3PFZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 3PFZ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 5
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 6
BGC
C
1 12BETA-D-GLUCOPYRANOSE
lig 7
BGC
C
2 11BETA-D-GLUCOPYRANOSE
lig 8
BGC
C
3 11BETA-D-GLUCOPYRANOSE
lig 9
BGC
C
4 11BETA-D-GLUCOPYRANOSE
lig 10
BGC
D
1 12BETA-D-GLUCOPYRANOSE
lig 11
BGC
D
2 11BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
440 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
SO4
A
441 5SULFATE ION
lig 14
SO4
A
444 5SULFATE ION