Analysis of Ligand-Protein Contacts in PDB entry:
3PGB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3PGB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPQ
A
504 145-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-B
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 5
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
CU
A
901 1COPPER (II) ION
lig 9
CA
A
902 1CALCIUM ION
lig 10
CA
A
903 1CALCIUM ION
lig 11
NAG
A
2361 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
4491 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
6511 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE