Analysis of Ligand-Protein Contacts in PDB entry:
3PKI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 61 ligands in PDB entry 3PKI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
UNX
A
354 1UNKNOWN ATOM OR ION
lig 2
ZN
A
1000 1ZINC ION
lig 3
UNX
A
355 1UNKNOWN ATOM OR ION
lig 4
AR6
A
2000 36 PHOSPHATE
lig 5
SO4
A
356 5SULFATE ION
lig 6
SO4
A
357 5SULFATE ION
lig 7
SO4
A
358 5SULFATE ION
lig 8
SO4
A
359 5SULFATE ION
lig 9
SO4
A
360 5SULFATE ION
lig 10
ZN
B
1000 1ZINC ION
lig 11
AR6
B
2000 36 PHOSPHATE
lig 12
UNX
B
354 1UNKNOWN ATOM OR ION
lig 13
SO4
B
360 5SULFATE ION
lig 14
UNX
B
355 1UNKNOWN ATOM OR ION
lig 15
SO4
B
361 5SULFATE ION
lig 16
UNX
B
356 1UNKNOWN ATOM OR ION
lig 17
SO4
B
362 5SULFATE ION
lig 18
UNX
B
357 1UNKNOWN ATOM OR ION
lig 19
UNX
B
358 1UNKNOWN ATOM OR ION
lig 20
UNX
B
359 1UNKNOWN ATOM OR ION
lig 21
ZN
C
1000 1ZINC ION
lig 22
AR6
C
2000 36 PHOSPHATE
lig 23
SO4
C
361 5SULFATE ION
lig 24
SO4
C
362 5SULFATE ION
lig 25
SO4
C
363 5SULFATE ION
lig 26
SO4
C
364 5SULFATE ION
lig 27
UNX
C
354 1UNKNOWN ATOM OR ION
lig 28
UNX
C
355 1UNKNOWN ATOM OR ION
lig 29
UNX
C
356 1UNKNOWN ATOM OR ION
lig 30
UNX
C
357 1UNKNOWN ATOM OR ION
lig 31
UNX
C
358 1UNKNOWN ATOM OR ION
lig 32
UNX
C
359 1UNKNOWN ATOM OR ION
lig 33
UNX
C
360 1UNKNOWN ATOM OR ION
lig 34
ZN
D
1000 1ZINC ION
lig 35
AR6
D
2000 36 PHOSPHATE
lig 36
SO4
D
357 5SULFATE ION
lig 37
SO4
D
358 5SULFATE ION
lig 38
SO4
D
359 5SULFATE ION
lig 39
UNX
D
354 1UNKNOWN ATOM OR ION
lig 40
UNX
D
355 1UNKNOWN ATOM OR ION
lig 41
UNX
D
356 1UNKNOWN ATOM OR ION
lig 42
ZN
E
1000 1ZINC ION
lig 43
AR6
E
2000 36 PHOSPHATE
lig 44
SO4
E
356 5SULFATE ION
lig 45
SO4
E
357 5SULFATE ION
lig 46
SO4
E
358 5SULFATE ION
lig 47
SO4
E
359 5SULFATE ION
lig 48
SO4
E
360 5SULFATE ION
lig 49
SO4
E
361 5SULFATE ION
lig 50
UNX
E
354 1UNKNOWN ATOM OR ION
lig 51
UNX
E
355 1UNKNOWN ATOM OR ION
lig 52
ZN
F
1000 1ZINC ION
lig 53
AR6
F
2000 36 PHOSPHATE
lig 54
SO4
F
360 5SULFATE ION
lig 55
SO4
F
361 5SULFATE ION
lig 56
UNX
F
354 1UNKNOWN ATOM OR ION
lig 57
UNX
F
355 1UNKNOWN ATOM OR ION
lig 58
UNX
F
356 1UNKNOWN ATOM OR ION
lig 59
UNX
F
357 1UNKNOWN ATOM OR ION
lig 60
UNX
F
358 1UNKNOWN ATOM OR ION
lig 61
UNX
F
359 1UNKNOWN ATOM OR ION