Analysis of Ligand-Protein Contacts in PDB entry:
3PNX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 3PNX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
OCS
A
120 9CYSTEINESULFONIC ACID
lig 2
OCS
B
120 9CYSTEINESULFONIC ACID
lig 3
OCS
C
120 9CYSTEINESULFONIC ACID
lig 4
OCS
D
120 9CYSTEINESULFONIC ACID
lig 5
OCS
E
120 9CYSTEINESULFONIC ACID
lig 6
OCS
F
120 9CYSTEINESULFONIC ACID
lig 7
CL
A
161 1CHLORIDE ION
lig 8
NA
A
164 1SODIUM ION
lig 9
NA
A
166 1SODIUM ION
lig 10
NA
A
170 1SODIUM ION
lig 11
GOL
A
175 6GLYCEROL
lig 12
NA
B
162 1SODIUM ION
lig 13
GOL
B
172 6GLYCEROL
lig 14
NA
C
169 1SODIUM ION
lig 15
CL
D
160 1CHLORIDE ION
lig 16
NA
D
165 1SODIUM ION
lig 17
NA
D
167 1SODIUM ION
lig 18
NA
D
171 1SODIUM ION
lig 19
GOL
D
173 6GLYCEROL
lig 20
GOL
D
174 6GLYCEROL
lig 21
NA
E
168 1SODIUM ION
lig 22
NA
F
163 1SODIUM ION