Analysis of Ligand-Protein Contacts in PDB entry:
3PQD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 5 ligands in PDB entry 3PQD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FBP
C
327 201,6-DI-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE
lig 2
NAD
D
327 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 3
FBP
D
328 201,6-DI-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE
lig 4
FBP
F
327 201,6-DI-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE
lig 5
FBP
G
327 201,6-DI-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE