Analysis of Ligand-Protein Contacts in PDB entry:
3PQR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 3PQR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
GLC
D
1 11ALPHA-D-GLUCOPYRANOSE
lig 6
GLC
D
2 12ALPHA-D-GLUCOPYRANOSE
lig 7
RET
A
401 20RETINAL
lig 8
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BOG
A
601 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 10
BOG
A
602 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 11
PLM
A
701 17PALMITIC ACID
lig 12
SO4
A
801 5SULFATE ION
lig 13
ACT
A
901 4ACETATE ION
lig 14
ACT
A
902 4ACETATE ION