Analysis of Ligand-Protein Contacts in PDB entry:
3QAP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 3QAP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
RET
A
240 20RETINAL
lig 2
BOG
A
241 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 3
LFA
A
242 10EICOSANE
lig 4
LFA
A
243 6EICOSANE
lig 5
LFA
A
244 10EICOSANE
lig 6
LFA
A
245 6EICOSANE
lig 7
LFA
A
246 8EICOSANE
lig 8
LFA
A
247 5EICOSANE
lig 9
LFA
A
248 7EICOSANE
lig 10
LFA
A
249 5EICOSANE
lig 11
LFA
A
250 9EICOSANE
lig 12
LFA
A
251 16EICOSANE
lig 13
LFA
A
252 12EICOSANE
lig 14
LFA
A
253 6EICOSANE
lig 15
LFA
A
254 16EICOSANE
lig 16
LFA
A
255 14EICOSANE
lig 17
LFA
A
256 5EICOSANE
lig 18
L2P
A
257 462,3-DI-PHYTANYL-GLYCEROL
lig 19
LFA
A
258 6EICOSANE
lig 20
LFA
A
259 4EICOSANE
lig 21
L2P
A
260 202,3-DI-PHYTANYL-GLYCEROL
lig 22
LFA
A
261 14EICOSANE
lig 23
LFA
A
262 6EICOSANE
lig 24
LFA
A
263 10EICOSANE
lig 25
LFA
A
264 9EICOSANE
lig 26
LFA
A
265 8EICOSANE
lig 27
LFA
A
266 10EICOSANE
lig 28
LFA
A
267 20EICOSANE
lig 29
LFA
A
268 7EICOSANE
lig 30
LFA
A
269 4EICOSANE
lig 31
LFA
A
270 4EICOSANE
lig 32
LFA
A
271 20EICOSANE
lig 33
LFA
A
272 12EICOSANE