Analysis of Ligand-Protein Contacts in PDB entry:
3QBK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 3QBK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RET
A
292 20RETINAL
lig 2
22B
A
300 27BACTERIORUBERIN
lig 3
BR
A
401 1BROMIDE ION
lig 4
BR
A
402 1BROMIDE ION
lig 5
BR
A
293 1BROMIDE ION
lig 6
RET
B
292 20RETINAL
lig 7
22B
B
300 27BACTERIORUBERIN
lig 8
BR
B
401 1BROMIDE ION
lig 9
RET
D
292 20RETINAL
lig 10
BR
D
402 1BROMIDE ION
lig 11
BR
D
401 1BROMIDE ION