Analysis of Ligand-Protein Contacts in PDB entry:
3QMO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 3QMO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NDG
C
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NDG
E
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 10
GOL
A
701 6GLYCEROL
lig 11
GOL
A
702 6GLYCEROL
lig 12
GOL
A
703 6GLYCEROL
lig 13
NS4
A
704 21N-[2-(CYCLOHEXYLOXY)-4-NITROPHENYL]METHANE
lig 14
HEM
A
705 43PROTOPORPHYRIN IX CONTAINING FE
lig 15
NAG
A
706 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BOG
A
707 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 17
MAN
B
701 11ALPHA-D-MANNOPYRANOSE
lig 18
GOL
B
702 6GLYCEROL
lig 19
GOL
B
703 6GLYCEROL
lig 20
GOL
B
704 6GLYCEROL
lig 21
NS4
B
705 21N-[2-(CYCLOHEXYLOXY)-4-NITROPHENYL]METHANE
lig 22
HEM
B
706 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
NAG
B
707 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE