Analysis of Ligand-Protein Contacts in PDB entry:
3R4X


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 30 ligands in PDB entry 3R4X. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
CA
A
601 1CALCIUM ION
lig 7
HEM
A
602 43PROTOPORPHYRIN IX CONTAINING FE
lig 8
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
IOD
A
605 1IODIDE ION
lig 11
IOD
A
606 1IODIDE ION
lig 12
IOD
A
607 1IODIDE ION
lig 13
IOD
A
608 1IODIDE ION
lig 14
IOD
A
609 1IODIDE ION
lig 15
IOD
A
610 1IODIDE ION
lig 16
IOD
A
611 1IODIDE ION
lig 17
IOD
A
612 1IODIDE ION
lig 18
IOD
A
613 1IODIDE ION
lig 19
IOD
A
614 1IODIDE ION
lig 20
IOD
A
615 1IODIDE ION
lig 21
ZN
A
616 1ZINC ION
lig 22
SCN
A
617 3THIOCYANATE ION
lig 23
PZA
A
618 9PYRAZINE-2-CARBOXAMIDE
lig 24
PZA
A
619 9PYRAZINE-2-CARBOXAMIDE
lig 25
PEG
A
620 7DI(HYDROXYETHYL)ETHER
lig 26
PEG
A
621 7DI(HYDROXYETHYL)ETHER
lig 27
GOL
A
622 6GLYCEROL
lig 28
GOL
A
623 6GLYCEROL
lig 29
EDO
A
624 41,2-ETHANEDIOL
lig 30
EDO
A
625 41,2-ETHANEDIOL