Analysis of Ligand-Protein Contacts in PDB entry:
3RY6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 3RY6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NDG
D
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 7
SIA
D
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
D
9 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUL
D
10 10BETA-L-FUCOPYRANOSE
lig 11
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
E
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
GAL
E
6 11BETA-D-GALACTOPYRANOSE
lig 17
SIA
E
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 18
MAN
E
8 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
E
9 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
GAL
E
10 11BETA-D-GALACTOPYRANOSE
lig 21
SIA
E
11 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 22
FUL
E
12 10BETA-L-FUCOPYRANOSE
lig 23
NDG
F
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 24
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
MAN
F
3 11ALPHA-D-MANNOPYRANOSE
lig 26
BMA
F
4 11BETA-D-MANNOPYRANOSE
lig 27
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 28
FUL
F
6 10BETA-L-FUCOPYRANOSE
lig 29
GOL
A
600 6GLYCEROL
lig 30
GOL
B
601 6GLYCEROL
lig 31
GOL
B
602 6GLYCEROL
lig 32
GOL
B
603 6GLYCEROL
lig 33
NAG
C
206 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE