Analysis of Ligand-Protein Contacts in PDB entry:
3SIO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 58 ligands in PDB entry 3SIO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
L
7 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
Q
5 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
Q
6 11ALPHA-D-MANNOPYRANOSE
lig 33
NAG
A
225 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
MLK
A
260 49METHYLLYCACONITINE
lig 35
MRD
B
250 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 36
MLK
B
260 49METHYLLYCACONITINE
lig 37
NAG
C
225 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
MRD
C
250 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 39
MLK
C
260 49METHYLLYCACONITINE
lig 40
MPD
C
222 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 41
MRD
D
251 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 42
MLK
D
260 49METHYLLYCACONITINE
lig 43
MRD
D
250 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 44
NAG
E
240 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
MLK
E
260 49METHYLLYCACONITINE
lig 46
NAG
F
225 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
MLK
F
260 49METHYLLYCACONITINE
lig 48
MRD
G
250 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 49
MLK
G
260 49METHYLLYCACONITINE
lig 50
NAG
H
225 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
MRD
H
250 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 52
MLK
H
260 49METHYLLYCACONITINE
lig 53
NAG
I
225 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
MPD
I
250 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 55
MLK
I
260 49METHYLLYCACONITINE
lig 56
MRD
I
222 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 57
NAG
J
240 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
MLK
J
260 49METHYLLYCACONITINE