Analysis of Ligand-Protein Contacts in PDB entry:
3SMN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 8 ligands in PDB entry 3SMN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
P
373 10PHOSPHOSERINE
lig 2
FC7
A
232 41FUSICOCCIN A-THF
lig 3
MG
A
233 1MAGNESIUM ION
lig 4
MG
A
234 1MAGNESIUM ION
lig 5
CA
A
235 1CALCIUM ION
lig 6
CA
A
236 1CALCIUM ION
lig 7
CL
A
237 1CHLORIDE ION
lig 8
CL
A
238 1CHLORIDE ION