Analysis of Ligand-Protein Contacts in PDB entry:
3SOM

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 67 ligands in PDB entry 3SOM. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	B12	A	301	91	COBALAMIN
lig 2	FLC	A	501	13	CITRATE ANION
lig 3	DHL	A	601	4	2-AMINO-ETHANETHIOL
lig 4	5AD	A	401	18	5'-DEOXYADENOSINE
lig 5	5AD	B	401	18	5'-DEOXYADENOSINE
lig 6	B12	B	301	91	COBALAMIN
lig 7	FLC	B	501	13	CITRATE ANION
lig 8	B12	C	301	91	COBALAMIN
lig 9	FLC	C	501	13	CITRATE ANION
lig 10	DHL	C	601	4	2-AMINO-ETHANETHIOL
lig 11	5AD	C	401	18	5'-DEOXYADENOSINE
lig 12	5AD	D	401	18	5'-DEOXYADENOSINE
lig 13	B12	D	301	91	COBALAMIN
lig 14	FLC	D	501	13	CITRATE ANION
lig 15	DHL	D	601	4	2-AMINO-ETHANETHIOL
lig 16	B12	E	301	91	COBALAMIN
lig 17	FLC	E	501	13	CITRATE ANION
lig 18	5AD	E	401	18	5'-DEOXYADENOSINE
lig 19	EDO	E	283	4	1,2-ETHANEDIOL
lig 20	5AD	F	401	18	5'-DEOXYADENOSINE
lig 21	B12	F	301	91	COBALAMIN
lig 22	FLC	F	501	13	CITRATE ANION
lig 23	DHL	F	601	4	2-AMINO-ETHANETHIOL
lig 24	B12	G	301	91	COBALAMIN
lig 25	FLC	G	501	13	CITRATE ANION
lig 26	DHL	G	601	4	2-AMINO-ETHANETHIOL
lig 27	5AD	G	401	18	5'-DEOXYADENOSINE
lig 28	5AD	G	283	18	5'-DEOXYADENOSINE
lig 29	5AD	H	401	18	5'-DEOXYADENOSINE
lig 30	B12	H	301	91	COBALAMIN
lig 31	FLC	H	501	13	CITRATE ANION
lig 32	DHL	H	601	4	2-AMINO-ETHANETHIOL
lig 33	B12	I	301	91	COBALAMIN
lig 34	FLC	I	501	13	CITRATE ANION
lig 35	DHL	I	601	4	2-AMINO-ETHANETHIOL
lig 36	5AD	I	401	18	5'-DEOXYADENOSINE
lig 37	5AD	I	283	18	5'-DEOXYADENOSINE
lig 38	5AD	J	401	18	5'-DEOXYADENOSINE
lig 39	B12	J	301	91	COBALAMIN
lig 40	FLC	J	501	13	CITRATE ANION
lig 41	DHL	J	601	4	2-AMINO-ETHANETHIOL
lig 42	B12	K	301	91	COBALAMIN
lig 43	FLC	K	501	13	CITRATE ANION
lig 44	DHL	K	601	4	2-AMINO-ETHANETHIOL
lig 45	5AD	K	401	18	5'-DEOXYADENOSINE
lig 46	5AD	L	401	18	5'-DEOXYADENOSINE
lig 47	B12	L	301	91	COBALAMIN
lig 48	FLC	L	501	13	CITRATE ANION
lig 49	DHL	L	601	4	2-AMINO-ETHANETHIOL
lig 50	B12	M	301	91	COBALAMIN
lig 51	FLC	M	501	13	CITRATE ANION
lig 52	DHL	M	601	4	2-AMINO-ETHANETHIOL
lig 53	5AD	M	401	18	5'-DEOXYADENOSINE
lig 54	5AD	N	401	18	5'-DEOXYADENOSINE
lig 55	B12	N	301	91	COBALAMIN
lig 56	FLC	N	501	13	CITRATE ANION
lig 57	DHL	N	601	4	2-AMINO-ETHANETHIOL
lig 58	B12	O	301	91	COBALAMIN
lig 59	FLC	O	501	13	CITRATE ANION
lig 60	DHL	O	601	4	2-AMINO-ETHANETHIOL
lig 61	5AD	O	401	18	5'-DEOXYADENOSINE
lig 62	5AD	P	401	18	5'-DEOXYADENOSINE
lig 63	B12	P	301	91	COBALAMIN
lig 64	FLC	P	501	13	CITRATE ANION
lig 65	DHL	P	601	4	2-AMINO-ETHANETHIOL
lig 66	EDO	P	283	4	1,2-ETHANEDIOL
lig 67	EDO	P	284	4	1,2-ETHANEDIOL

Analysis of Ligand-Protein Contacts in PDB entry: 3SOM

Analysis of Ligand-Protein Contacts in PDB entry:
3SOM