Analysis of Ligand-Protein Contacts in PDB entry:
3SQR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 3SQR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 10
CU
A
544 1COPPER (II) ION
lig 11
CU
A
545 1COPPER (II) ION
lig 12
CU
A
546 1COPPER (II) ION
lig 13
NAG
A
547 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
548 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
558 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
559 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
560 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
MAN
A
561 11ALPHA-D-MANNOPYRANOSE
lig 19
SO4
A
562 5SULFATE ION