Analysis of Ligand-Protein Contacts in PDB entry:
3T6D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 3T6D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
H
1 10N-FORMYLMETHIONINE
lig 2
HEC
C
401 43HEME C
lig 3
HEC
C
402 43HEME C
lig 4
HEC
C
403 43HEME C
lig 5
HEC
C
404 43HEME C
lig 6
LDA
C
716 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 7
LDA
C
722 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 8
DGA
C
730 37DIACYL GLYCEROL
lig 9
SO4
C
337 5SULFATE ION
lig 10
SO4
C
338 5SULFATE ION
lig 11
SO4
C
339 5SULFATE ION
lig 12
SO4
C
340 5SULFATE ION
lig 13
SO4
C
341 5SULFATE ION
lig 14
SO4
C
342 5SULFATE ION
lig 15
SO4
C
343 5SULFATE ION
lig 16
SO4
C
344 5SULFATE ION
lig 17
SO4
C
345 5SULFATE ION
lig 18
SO4
C
346 5SULFATE ION
lig 19
SO4
C
347 5SULFATE ION
lig 20
SO4
C
348 5SULFATE ION
lig 21
SO4
C
349 5SULFATE ION
lig 22
SO4
C
350 5SULFATE ION
lig 23
SO4
C
351 5SULFATE ION
lig 24
SO4
C
352 5SULFATE ION
lig 25
SO4
C
353 5SULFATE ION
lig 26
SO4
C
354 5SULFATE ION
lig 27
HTO
C
355 10HEPTANE-1,2,3-TRIOL
lig 28
HTO
C
356 10HEPTANE-1,2,3-TRIOL
lig 29
HTO
C
357 10HEPTANE-1,2,3-TRIOL
lig 30
HTO
C
358 10HEPTANE-1,2,3-TRIOL
lig 31
GOL
C
359 6GLYCEROL
lig 32
GOL
C
360 6GLYCEROL
lig 33
GOL
C
361 6GLYCEROL
lig 34
GOL
C
362 6GLYCEROL
lig 35
GOL
C
363 6GLYCEROL
lig 36
GOL
C
364 6GLYCEROL
lig 37
GOL
C
365 6GLYCEROL
lig 38
GOL
C
366 6GLYCEROL
lig 39
GOL
C
367 6GLYCEROL
lig 40
GOL
C
368 6GLYCEROL
lig 41
GOL
C
369 6GLYCEROL
lig 42
GOL
C
370 6GLYCEROL
lig 43
GOL
C
371 6GLYCEROL
lig 44
GOL
C
372 6GLYCEROL
lig 45
GOL
C
373 6GLYCEROL
lig 46
GOL
C
375 6GLYCEROL
lig 47
GOL
C
376 6GLYCEROL
lig 48
GOL
C
377 6GLYCEROL
lig 49
GOL
C
378 6GLYCEROL
lig 50
LDA
H
701 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 51
LDA
H
719 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 52
LDA
H
720 5LAURYL DIMETHYLAMINE-N-OXIDE