Analysis of Ligand-Protein Contacts in PDB entry:
3TMQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 3TMQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
A5P
A
282 14ARABINOSE-5-PHOSPHATE
lig 2
NO3
A
283 4NITRATE ION
lig 3
NO3
A
284 4NITRATE ION
lig 4
NO3
A
285 4NITRATE ION
lig 5
EDO
A
286 41,2-ETHANEDIOL
lig 6
NO3
B
282 4NITRATE ION
lig 7
NO3
B
283 4NITRATE ION
lig 8
EDO
B
284 41,2-ETHANEDIOL
lig 9
EDO
B
285 41,2-ETHANEDIOL
lig 10
A5P
C
282 14ARABINOSE-5-PHOSPHATE
lig 11
NO3
C
283 4NITRATE ION
lig 12
NO3
C
284 4NITRATE ION
lig 13
NO3
C
285 4NITRATE ION
lig 14
NO3
C
286 4NITRATE ION
lig 15
EDO
C
287 41,2-ETHANEDIOL
lig 16
NO3
D
282 4NITRATE ION
lig 17
EDO
D
283 41,2-ETHANEDIOL