Analysis of Ligand-Protein Contacts in PDB entry:
3TOD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 3TOD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
FE
A
694 1FE (III) ION
lig 8
ZN
A
695 1ZINC ION
lig 9
ZN
A
696 1ZINC ION
lig 10
CO3
A
697 4CARBONATE ION
lig 11
SO4
A
698 5SULFATE ION
lig 12
GOL
A
699 6GLYCEROL
lig 13
GOL
A
700 6GLYCEROL
lig 14
EOH
A
701 3ETHANOL
lig 15
EOH
A
703 3ETHANOL
lig 16
XXB
A
777 121-BUTYL-1H-PYRAZOLE-5-CARBOXYLIC ACID