Analysis of Ligand-Protein Contacts in PDB entry:
3TRQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 3TRQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MRD
A
354 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 6
MPD
A
355 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MRD
A
356 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 8
MPD
A
357 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
CA
A
358 1CALCIUM ION
lig 10
CA
A
359 1CALCIUM ION
lig 11
CA
A
360 1CALCIUM ION
lig 12
CA
A
361 1CALCIUM ION
lig 13
CA
A
362 1CALCIUM ION
lig 14
CA
A
363 1CALCIUM ION
lig 15
NA
A
364 1SODIUM ION
lig 16
NA
A
365 1SODIUM ION
lig 17
NA
A
366 1SODIUM ION