Analysis of Ligand-Protein Contacts in PDB entry:
3TY9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 3TY9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
AMP
A
900 22ADENOSINE MONOPHOSPHATE
lig 2
MPD
A
905 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 3
MPD
A
906 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
907 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MRD
A
908 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 6
MRD
A
909 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 7
GOL
A
910 6GLYCEROL
lig 8
MG
A
1000 1MAGNESIUM ION
lig 9
AMP
B
900 22ADENOSINE MONOPHOSPHATE
lig 10
MPD
B
905 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 11
MRD
B
906 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 12
MRD
B
907 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 13
MRD
B
908 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 14
MG
B
1000 1MAGNESIUM ION
lig 15
AMP
C
900 22ADENOSINE MONOPHOSPHATE
lig 16
MPD
C
905 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
MPD
C
906 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
MPD
C
907 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
MG
C
1000 1MAGNESIUM ION
lig 20
AMP
D
900 22ADENOSINE MONOPHOSPHATE
lig 21
MPD
D
905 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 22
MPD
D
906 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MPD
D
907 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 24
MRD
D
908 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 25
MG
D
1000 1MAGNESIUM ION