Analysis of Ligand-Protein Contacts in PDB entry:
3VAA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3VAA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BME
A
176 4BETA-MERCAPTOETHANOL
lig 2
GOL
A
177 6GLYCEROL
lig 3
PEG
A
178 7DI(HYDROXYETHYL)ETHER
lig 4
BME
B
176 4BETA-MERCAPTOETHANOL
lig 5
GOL
B
177 6GLYCEROL
lig 6
BME
C
176 4BETA-MERCAPTOETHANOL
lig 7
SO4
C
177 5SULFATE ION