Analysis of Ligand-Protein Contacts in PDB entry:
3VBN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3VBN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
COA
A
189 48COENZYME A
lig 2
TYD
A
301 25THYMIDINE-5'-DIPHOSPHATE
lig 3
CL
A
190 1CHLORIDE ION
lig 4
COA
C
189 48COENZYME A
lig 5
TYD
C
301 25THYMIDINE-5'-DIPHOSPHATE
lig 6
COA
E
189 48COENZYME A
lig 7
TYD
E
301 25THYMIDINE-5'-DIPHOSPHATE