Analysis of Ligand-Protein Contacts in PDB entry:
3VC1

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 3VC1. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	MG	A	301	1	MAGNESIUM ION
lig 2	SAH	A	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 3	GST	A	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 4	GOL	A	304	6	GLYCEROL
lig 5	GOL	A	305	6	GLYCEROL
lig 6	GOL	A	306	6	GLYCEROL
lig 7	MG	B	301	1	MAGNESIUM ION
lig 8	SAH	B	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 9	GST	B	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 10	GOL	B	304	6	GLYCEROL
lig 11	MG	C	301	1	MAGNESIUM ION
lig 12	SAH	C	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 13	GST	C	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 14	GOL	C	304	6	GLYCEROL
lig 15	GOL	C	305	6	GLYCEROL
lig 16	MG	D	301	1	MAGNESIUM ION
lig 17	SAH	D	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 18	GST	D	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 19	GOL	D	304	6	GLYCEROL
lig 20	MG	E	301	1	MAGNESIUM ION
lig 21	SAH	E	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 22	GST	E	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 23	SO4	E	304	5	SULFATE ION
lig 24	GOL	E	305	6	GLYCEROL
lig 25	GOL	E	306	6	GLYCEROL
lig 26	MG	F	301	1	MAGNESIUM ION
lig 27	SAH	F	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 28	GST	F	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 29	GOL	F	304	6	GLYCEROL
lig 30	MG	G	301	1	MAGNESIUM ION
lig 31	SAH	G	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 32	GST	G	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 33	GOL	G	304	6	GLYCEROL
lig 34	MG	H	301	1	MAGNESIUM ION
lig 35	SAH	H	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 36	GST	H	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 37	GOL	H	304	6	GLYCEROL
lig 38	MG	I	301	1	MAGNESIUM ION
lig 39	SAH	I	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 40	GST	I	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 41	GOL	I	304	6	GLYCEROL
lig 42	MG	J	301	1	MAGNESIUM ION
lig 43	SAH	J	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 44	GST	J	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 45	GOL	J	304	6	GLYCEROL
lig 46	MG	K	301	1	MAGNESIUM ION
lig 47	SAH	K	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 48	GST	K	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 49	MG	L	301	1	MAGNESIUM ION
lig 50	SAH	L	302	26	S-ADENOSYL-L-HOMOCYSTEINE
lig 51	GST	L	303	19	GERANYL S-THIOLODIPHOSPHATE
lig 52	GOL	L	304	6	GLYCEROL

Analysis of Ligand-Protein Contacts in PDB entry: 3VC1

Analysis of Ligand-Protein Contacts in PDB entry:
3VC1