Analysis of Ligand-Protein Contacts in PDB entry:
3VC2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 3VC2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
301 1MAGNESIUM ION
lig 2
SAH
A
302 26S-ADENOSYL-L-HOMOCYSTEINE
lig 3
GPP
A
303 19GERANYL DIPHOSPHATE
lig 4
SAH
B
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 5
SAH
C
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 6
MG
D
301 1MAGNESIUM ION
lig 7
SAH
D
302 26S-ADENOSYL-L-HOMOCYSTEINE
lig 8
GPP
D
303 19GERANYL DIPHOSPHATE
lig 9
SAH
E
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 10
SO4
E
302 5SULFATE ION
lig 11
SAH
F
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 12
SAH
G
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 13
MG
H
301 1MAGNESIUM ION
lig 14
SAH
H
302 26S-ADENOSYL-L-HOMOCYSTEINE
lig 15
GPP
H
303 19GERANYL DIPHOSPHATE
lig 16
SAH
I
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 17
MG
J
301 1MAGNESIUM ION
lig 18
SAH
J
302 26S-ADENOSYL-L-HOMOCYSTEINE
lig 19
GPP
J
303 19GERANYL DIPHOSPHATE
lig 20
SAH
K
301 26S-ADENOSYL-L-HOMOCYSTEINE
lig 21
SAH
L
301 26S-ADENOSYL-L-HOMOCYSTEINE